Here are some explicit readings and review questions from Stanley, Earth System History, 2nd ed.
Some of the lecture notes on the web also list relevant text book pages and figures.

Climate and Environment - Chapter 4

read esp. p. 85-87 (The Atmosphere)

and p. 95 (Winds Drive Ocean Currents)

see also reference to textbook in lecture notes
Review Qs: p. 101, 6, 8

Sedimentary Environments - Chapter 5

read esp. p. 108 (glacial) through 114 (meandering rivers)

and 138 - 148 (marine environments)

see also reference to textbook in lecture notes

Chapter Summary

Review Questions, p. 127, 1-4, 9, 12-13

Correlation and Dating of the Rock Record- Chapter 6

read p. 129-144
see also lecture notes for correlated text pages
Review Questions, p. 151, 1-3, 5, [6-7], 12

Evolution and the Fossil Record - Chapter 7

read esp. p. 153-160 and 171-173

Chapter Summary

Review Questions, p. 175, 1, 2, 11

The Carbon Cycle and Climate - Chapter 10

read 224-238 (minus section on carbon isotopes)

Chapter Summary

Review Questions 1-2, 4-9, 12

Origin of the Earth, Oceans, Atmosphere, and the first Continents in the Archean- Chapter 11

read 247-262 and 264-265, 270

The Origin and Growth of Laurentia, Rodinia, Gondwana - Chapter 12

read 287-295 (minus section on Middle Proterozoic Rifting)

Origin of Life and Early Evidence For Life in the Archean - Chapter 11

read 262-270

Proterozoic Life and Evolution of the Atmosphere - Chapter 12

read 278-286 and 288-289

The Cambrian Revolution and Early Paleozoic Animal Life - Chapter 13

read esp. 299-312

The Appalachian Orogen - Chapters 13, 14, 15

Cambrian paleogeography: 312-313

Taconic Orogeny: 318-322

Taconic clastic wedge & Acadian Orogeny: 344-350

Appalachian (Alleghenian) Orogeny & Ouachita Orogeny: 372-378
Late Paleozoic glaciation: 366-367, 369-370

Evolution of Vertebrates and Invasion of the Land - Chapters 14, 15

evolution of fish: 333-337

invasion of the land: 337-343

Late Pz terrestrial life: 360-369

Permian extinctions: 372, 374-376

The Breakup of Pangea - Chapters 16, 17

Breakup of Pangea: 405-406

Rift Basins (Newark Basin): 409-410

New Continents and Oceans: 428-430

The Western Cordillera - Chapters 14, 16, 17, 18, 19

Antler Orogeny: 351-352

Jurassic orogenies and Magmatism: 410-413

Foreland Basin: 414

Sevier Orogeny: 437-438

Laramide Orogeny: 460-463

Basin and Range: 489-494

San Andreas Fault: 494 and figures 19-26 thru 19-29

The Alpine-Himalayan Mountain Belt - Chapters 19

499-502

Life in the Mesozoic - Chapters 16, 17

Mesozoic life: esp. 387-404

Cretaceous life: 423 (Flowering Plants) - 428

K-T extinctions: 433-437

Cretaceous Greenhouse to Cenozoic Icehouse Climate - Chapters 17, 18, 19, 20

High Cretaceous Sea Level: 430-431

Cretaceous Greenhouse Climate: 431-433
Early Cenozoic warmth; Eocene-Oligocene cooling: 455-460

Thermal isolation of Antarctica: 458-459

Deterioration of Cenozoic Climate: 477-488

Closure of Isthmus of Panama: 484-487

Late Cenozoic glacial cycles: 480-488

Holocene Climate: 515-520; 522-523; 525-537

Life in the Cenozoic - Chapters 18, 19, 20

Cenozoic life: esp. 448-454

Hominid evolution: 502-512

Extinction of Large Mammals: 521-525